PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ciclev10006728m
Common NameCICLE_v10006728mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family WRKY
Protein Properties Length: 139aa    MW: 15660.7 Da    PI: 6.7658
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ciclev10006728mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY345.7e-11901282259
                      EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY  22 rsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       +YY C++a g pv+k+v r+aed++++++tYeg+ nh+
  Ciclev10006728m  90 LNYYHCSMAtGSPVRKQVRRCAEDQTILIMTYEGKPNHP 128
                      58******999***************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182906.54E-891130IPR003657WRKY domain
PfamPF031061.7E-791128IPR003657WRKY domain
PROSITE profilePS5081113.28791130IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.2E-1191130IPR003657WRKY domain
SMARTSM007740.003291129IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
MDRSFDLQLT CMDVMSREDR KEMAWSFRLA KKRGSTDDDD DPDQTLKASP KFGELADHEK  60
DQELARNGKA RVYTRSSWVS CTNVMDVLAL NYYHCSMATG SPVRKQVRRC AEDQTILIMT  120
YEGKPNHPPP PAAAAMTI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006419204.11e-101hypothetical protein CICLE_v10006728mg
TrEMBLV4TZL01e-101V4TZL0_9R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.12e-14WRKY family protein